The trial court has got no jurisdiction to transfer the case in another state.
However you can pray the concerned trial court to reject the case and return the papers to the complainant so that the complainant may file it in the court having jurisdiction. You may give the citation of the recent judgement.
Alternately you can also move to supreme court and get the case transferred.
The jurisdiction is not at the place where the cheque is bounce, but where the bank branch of account holder is situated. The whole judgement was regarding jurisdiction only. The apex court was worried that the complainant to harass the accused, deposit cheque at a far off place or city.